STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW86285.1Cupin domain protein. (174 aa)    
Predicted Functional Partners:
SDW86323.1
Tripartite tricarboxylate transporter family receptor.
       0.773
SDX94985.1
Hypothetical protein.
  
     0.641
SDW13292.1
Transcriptional regulator, XRE family with cupin sensor.
  
 0.612
SDX36199.1
Transcriptional regulator, XRE family with cupin sensor.
  
 0.612
SDY18269.1
Transcriptional regulator, GntR family.
 
    0.573
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.538
SDW86245.1
Transcriptional regulator, IclR family.
     
 0.537
SDX95025.1
Hypothetical protein.
  
     0.483
SDX92827.1
NAD-dependent protein deacetylase, SIR2 family.
  
    0.452
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
    0.449
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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