Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX15884.1 | SDX15957.1 | SAMN05443545_104122 | SAMN05443545_104124 | GTPase, G3E family. | Transporter, NhaC family. | 0.559 |
SDX15884.1 | SDX15997.1 | SAMN05443545_104122 | SAMN05443545_104125 | GTPase, G3E family. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.451 |
SDX15884.1 | aguA | SAMN05443545_104122 | SAMN05443545_104123 | GTPase, G3E family. | Agmatine deiminase. | 0.559 |
SDX15957.1 | SDX15884.1 | SAMN05443545_104124 | SAMN05443545_104122 | Transporter, NhaC family. | GTPase, G3E family. | 0.559 |
SDX15957.1 | SDX15997.1 | SAMN05443545_104124 | SAMN05443545_104125 | Transporter, NhaC family. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.610 |
SDX15957.1 | SDX16031.1 | SAMN05443545_104124 | SAMN05443545_104126 | Transporter, NhaC family. | N-carbamoyl-L-amino-acid hydrolase. | 0.423 |
SDX15957.1 | SDX16069.1 | SAMN05443545_104124 | SAMN05443545_104127 | Transporter, NhaC family. | Transcriptional regulator, LuxR family. | 0.449 |
SDX15957.1 | SDX59747.1 | SAMN05443545_104124 | SAMN05443545_106153 | Transporter, NhaC family. | Nucleoside recognition GATE domain-containing membrane protein YjiH. | 0.465 |
SDX15957.1 | aguA | SAMN05443545_104124 | SAMN05443545_104123 | Transporter, NhaC family. | Agmatine deiminase. | 0.781 |
SDX15997.1 | SDX15884.1 | SAMN05443545_104125 | SAMN05443545_104122 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | GTPase, G3E family. | 0.451 |
SDX15997.1 | SDX15957.1 | SAMN05443545_104125 | SAMN05443545_104124 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Transporter, NhaC family. | 0.610 |
SDX15997.1 | SDX16031.1 | SAMN05443545_104125 | SAMN05443545_104126 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | N-carbamoyl-L-amino-acid hydrolase. | 0.561 |
SDX15997.1 | aguA | SAMN05443545_104125 | SAMN05443545_104123 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Agmatine deiminase. | 0.610 |
SDX16031.1 | SDX15957.1 | SAMN05443545_104126 | SAMN05443545_104124 | N-carbamoyl-L-amino-acid hydrolase. | Transporter, NhaC family. | 0.423 |
SDX16031.1 | SDX15997.1 | SAMN05443545_104126 | SAMN05443545_104125 | N-carbamoyl-L-amino-acid hydrolase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.561 |
SDX16031.1 | aguA | SAMN05443545_104126 | SAMN05443545_104123 | N-carbamoyl-L-amino-acid hydrolase. | Agmatine deiminase. | 0.423 |
SDX16069.1 | SDX15957.1 | SAMN05443545_104127 | SAMN05443545_104124 | Transcriptional regulator, LuxR family. | Transporter, NhaC family. | 0.449 |
SDX59747.1 | SDX15957.1 | SAMN05443545_106153 | SAMN05443545_104124 | Nucleoside recognition GATE domain-containing membrane protein YjiH. | Transporter, NhaC family. | 0.465 |
aguA | SDX15884.1 | SAMN05443545_104123 | SAMN05443545_104122 | Agmatine deiminase. | GTPase, G3E family. | 0.559 |
aguA | SDX15957.1 | SAMN05443545_104123 | SAMN05443545_104124 | Agmatine deiminase. | Transporter, NhaC family. | 0.781 |
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