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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX17497.1Type VI secretion system protein ImpG. (586 aa)    
Predicted Functional Partners:
SDX17652.1
Type VI secretion system protein ImpJ.
 
 
 0.995
SDX17420.1
Type VI secretion system protein ImpC.
 
  
 0.989
SDX17536.1
Type VI secretion system protein ImpH.
  
 0.983
SDX17702.1
Type VI secretion system protein ImpK.
 
  
 0.982
SDX17379.1
Type VI secretion system protein ImpB.
 
  
 0.979
SDX17616.1
Type VI secretion system protein VasD.
 
  
 0.979
SDX17861.1
Type VI secretion system protein VasJ.
 
  
 0.968
SDX17575.1
FHA domain protein.
 
  
 0.966
SDX17739.1
Type VI secretion system protein VasG; Belongs to the ClpA/ClpB family.
 
  
 0.950
SDX17903.1
Type VI secretion system protein ImpL.
 
  
 0.949
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.