STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX20154.1Transcriptional regulator, LacI family. (345 aa)    
Predicted Functional Partners:
SDW30900.1
Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family.
 
 
 
 0.934
SDW66182.1
Glutamate synthase (NADPH) large subunit.
    
 
 0.843
SDX64343.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.843
SDX20191.1
3-hydroxyisobutyrate dehydrogenase.
   
   0.570
SDX20278.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
       0.479
SDX20240.1
Uncharacterized conserved protein YgbK, DUF1537 family.
       0.476
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 
 0.405
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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