STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX21634.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (80 aa)    
Predicted Functional Partners:
SDX21675.1
Toxin-antitoxin system, toxin component, Txe/YoeB family.
 
 
 0.993
SDX24341.1
Toxin YoeB.
  
 
 0.847
SDX57465.1
RelE toxin of RelE / RelB toxin-antitoxin system.
   
 
 0.436
SDX58415.1
mRNA interferase RelE/StbE.
   
 
 0.436
SDX21601.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
       0.429
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.