STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX35185.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (343 aa)    
Predicted Functional Partners:
SDX59997.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 0.994
SDW06270.1
Two-component system, NarL family, sensor histidine kinase BarA.
 0.972
SDW05284.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.962
SDW53500.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 
 0.931
SDX59955.1
PAS domain S-box-containing protein.
 
 0.896
SDW31005.1
Signal transduction histidine kinase.
 0.895
SDW20193.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.862
SDW22214.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.853
SDX62039.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
0.839
SDX62879.1
Diguanylate cyclase (GGDEF) domain-containing protein.
0.839
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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