STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX35938.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (293 aa)    
Predicted Functional Partners:
SDX35980.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.997
SDX35852.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.997
SDX35894.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.997
SDX36068.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.994
SDX36022.1
Predicted small integral membrane protein.
 
    0.951
SDW28001.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.907
SDW26572.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.846
SDW27890.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.846
SDX14256.1
Sorbitol ABC transporter membrane protein.
 0.824
ugpC
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
  
  0.814
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.