STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX58652.1Amino acid ABC transporter substrate-binding protein, PAAT family. (238 aa)    
Predicted Functional Partners:
SDX58708.1
Glutamine synthetase.
 
    0.846
SDX77275.1
Polar amino acid transport system permease protein.
  
  0.832
SDW93354.1
Amino acid ABC transporter membrane protein, PAAT family.
  
  0.831
SDX77340.1
Polar amino acid transport system permease protein.
  
  0.831
SDW83888.1
Amino acid ABC transporter membrane protein, PAAT family.
  
  0.814
SDX77254.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
  0.811
SDW34067.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
  0.810
SDW93303.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
  0.807
SDW83943.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
  0.798
SDW34116.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 
  0.784
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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