STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX52906.1Hypothetical protein. (326 aa)    
Predicted Functional Partners:
SDX52864.1
Hypothetical protein.
       0.709
SDX97954.1
Glycosyl transferase 4-like.
 
     0.576
SDX98049.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.572
SDX52951.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.445
SDX52998.1
Glycosyltransferase, GT2 family.
       0.445
SDX53047.1
Hypothetical protein.
       0.445
SDX53104.1
Hypothetical protein.
       0.445
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.