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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX52998.1Glycosyltransferase, GT2 family. (258 aa)    
Predicted Functional Partners:
SDX53156.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.851
SDX52951.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.799
SDX53047.1
Hypothetical protein.
       0.773
SDX53104.1
Hypothetical protein.
       0.773
SDX98086.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.612
SDX56314.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.591
SDX53841.1
Tyrosine-protein kinase Etk/Wzc.
 
  
 0.575
SDX53936.1
Polysaccharide export outer membrane protein.
 
  
 0.518
SDX52906.1
Hypothetical protein.
       0.445
SDX52864.1
Hypothetical protein.
       0.414
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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