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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX73457.1TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein. (337 aa)    
Predicted Functional Partners:
SDX73426.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
 
  0.990
SDX73383.1
TRAP transporter, DctM subunit.
 
 
  0.989
SDX00131.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.770
SDX00088.1
TRAP transporter, DctM subunit.
 
    0.757
SDW30017.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.713
SDW29966.1
TRAP transporter, DctM subunit.
 
    0.704
SDX73350.1
Hypothetical protein.
       0.524
SDY06605.1
TRAP transporter, DctM subunit.
  
     0.514
SDW84120.1
TRAP transporter, DctM subunit.
  
     0.510
SDW34507.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.457
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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