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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX73649.1L-arabinose ABC transporter ATP-binding protein. (497 aa)    
Predicted Functional Partners:
SDX94788.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.993
SDX73692.1
L-arabinose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 0.991
SDX73565.1
L-arabinose transport system substrate-binding protein.
 
  0.958
SDX94831.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.949
SDX45523.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.940
SDX45563.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.936
SDX15648.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.894
SDX15688.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
  0.662
SDX15238.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
  0.660
SDX15194.1
Transcriptional regulator, LacI family.
  
  0.601
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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