STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX93748.1Serine/threonine protein kinase. (577 aa)    
Predicted Functional Partners:
SDX34109.1
Serine/threonine protein kinase.
 
0.983
SDW06270.1
Two-component system, NarL family, sensor histidine kinase BarA.
  
 0.963
SDW19940.1
Adenylate cyclase.
  
 0.956
SDX59955.1
PAS domain S-box-containing protein.
  
 0.956
SDY19622.1
Protein of unknown function.
   
 
 0.915
kdkA
3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.
   
 0.902
SDX93788.1
Formate/nitrite transporter.
 
     0.902
SDW31005.1
Signal transduction histidine kinase.
  
 0.874
SDW57665.1
PAS domain S-box-containing protein.
  
 0.850
SDX17903.1
Type VI secretion system protein ImpL.
  
 
 0.847
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.