STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX99711.1TRAP transporter, DctM subunit. (428 aa)    
Predicted Functional Partners:
SDX99767.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  0.994
SDX99661.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  0.992
SDX99573.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 
  0.974
SDX99517.1
TRAP-type C4-dicarboxylate transport system, small permease component.
   
  0.935
SDX55649.1
C4-dicarboxylate-binding protein DctP.
 
    0.797
SDY18338.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.778
SDX93091.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.774
SDW98495.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.773
SDW63335.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.771
SDX93535.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.771
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.