STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY06335.1Uncharacterized conserved protein. (120 aa)    
Predicted Functional Partners:
SDX21019.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family.
 
     0.798
SDY06372.1
Methyltransferase domain-containing protein.
 
     0.644
SDW59912.1
PhnB protein.
 
    0.621
SDY06299.1
Hypothetical protein.
       0.599
SDX76486.1
Dihydrofolate reductase.
 
     0.486
SDW61549.1
Predicted dithiol-disulfide oxidoreductase, DUF899 family.
 
    0.451
SDX21053.1
Uncharacterized conserved protein.
 
   
0.422
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.