Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX90957.1 | SDY07548.1 | SAMN05443545_10847 | SAMN05443545_11076 | 4,5-DOPA dioxygenase extradiol. | Hypothetical protein; Belongs to the pirin family. | 0.720 |
SDY07467.1 | SDY07512.1 | SAMN05443545_11074 | SAMN05443545_11075 | Putative glutathione S-transferase. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.597 |
SDY07467.1 | SDY07548.1 | SAMN05443545_11074 | SAMN05443545_11076 | Putative glutathione S-transferase. | Hypothetical protein; Belongs to the pirin family. | 0.573 |
SDY07467.1 | azoR | SAMN05443545_11074 | SAMN05443545_11016 | Putative glutathione S-transferase. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.454 |
SDY07512.1 | SDY07467.1 | SAMN05443545_11075 | SAMN05443545_11074 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative glutathione S-transferase. | 0.597 |
SDY07512.1 | SDY07548.1 | SAMN05443545_11075 | SAMN05443545_11076 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein; Belongs to the pirin family. | 0.600 |
SDY07548.1 | SDX90957.1 | SAMN05443545_11076 | SAMN05443545_10847 | Hypothetical protein; Belongs to the pirin family. | 4,5-DOPA dioxygenase extradiol. | 0.720 |
SDY07548.1 | SDY07467.1 | SAMN05443545_11076 | SAMN05443545_11074 | Hypothetical protein; Belongs to the pirin family. | Putative glutathione S-transferase. | 0.573 |
SDY07548.1 | SDY07512.1 | SAMN05443545_11076 | SAMN05443545_11075 | Hypothetical protein; Belongs to the pirin family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.600 |
SDY07548.1 | SDY07590.1 | SAMN05443545_11076 | SAMN05443545_11077 | Hypothetical protein; Belongs to the pirin family. | Murein DD-endopeptidase. | 0.429 |
SDY07548.1 | azoR | SAMN05443545_11076 | SAMN05443545_11016 | Hypothetical protein; Belongs to the pirin family. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.465 |
SDY07590.1 | SDY07548.1 | SAMN05443545_11077 | SAMN05443545_11076 | Murein DD-endopeptidase. | Hypothetical protein; Belongs to the pirin family. | 0.429 |
azoR | SDY07467.1 | SAMN05443545_11016 | SAMN05443545_11074 | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Putative glutathione S-transferase. | 0.454 |
azoR | SDY07548.1 | SAMN05443545_11016 | SAMN05443545_11076 | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Hypothetical protein; Belongs to the pirin family. | 0.465 |