STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY07685.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG. (228 aa)    
Predicted Functional Partners:
SDX53482.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.776
SDY05933.1
Gluconate 5-dehydrogenase.
  
  
  0.699
SDW86994.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
  
  0.678
SDW86856.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
  
  0.655
SDW87498.1
L-threonine aldolase.
    
  0.624
SDX83508.1
2-deoxy-D-gluconate 3-dehydrogenase.
 
  
  0.537
SDY11281.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.505
SDY07181.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
  
 
0.504
SDY07638.1
MFS transporter, NNP family, nitrate/nitrite transporter.
       0.501
SDY06800.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
  
  
  0.466
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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