STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lutBAmino acid dehydrogenase; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. (477 aa)    
Predicted Functional Partners:
lutA
Fe-S oxidoreductase; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.
 
 0.996
lutA-2
Fe-S oxidoreductase; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.
 
 0.992
lutC
Lactate utilization protein C; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.
 
 
 0.989
lutC-2
Lactate utilization protein C; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source.
 
 
 0.953
BAMA_15165
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.947
BAMA_08240
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.757
BAMA_19535
Glycolate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.719
BAMA_23655
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.679
BAMA_01545
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.572
pyrK
Dihydroorotate dehydrogenase; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
  0.560
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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