Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAMA_01775ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)    
Predicted Functional Partners:
BAMA_01770
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.975
BAMA_10415
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.879
BAMA_01780
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.855
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
  
    0.757
BAMA_01760
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
BAMA_13320
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.659
BAMA_19430
Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.536
thrB
Hypothetical protein; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
       0.452
BAMA_01790
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
       0.446
BAMA_01795
Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.446
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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