STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tlpSmall acid-soluble spore protein Tlp; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Tlp family. (74 aa)    
Predicted Functional Partners:
sspN
SASP N; found in forespore compartment; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.948
sspO
SASP O; found in forespore compartment; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspO family.
   
  
 0.863
sspP
SASP P; found in forespore compartment; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspP family.
   
  
 0.729
BAMA_13440
Imidazole glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.665
BAMA_06765
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.657
BAMA_17960
Cell division protein FtsN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
BAMA_05665
Cell division protein FtsN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.642
BAMA_17945
Cell division protein FtsN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.640
BAMA_17955
Cell division protein FtsN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
BAMA_14005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.621
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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