close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sspPSASP P; found in forespore compartment; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspP family. (47 aa)    
Predicted Functional Partners:
sspO
SASP O; found in forespore compartment; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspO family.
  
  
 0.812
sspN
SASP N; found in forespore compartment; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.655
sspK
SASP K; found in the forespore compartment; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspK family.
   
  
 0.608
BAMA_03425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.594
BAMA_03435
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.520
tlp
Small acid-soluble spore protein Tlp; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Tlp family.
   
    0.511
BAMA_05535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.420
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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