Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAMA_03580DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. (137 aa)    
Predicted Functional Partners:
BAMA_03920
RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
   
    0.813
BAMA_14685
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
   
    0.742
BAMA_07855
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.710
BAMA_07180
Amino acid aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.693
BAMA_04010
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.671
BAMA_24130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.553
BAMA_21240
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.547
BAMA_03585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.542
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.499
BAMA_03575
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.490
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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