Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAMA_04075Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
BAMA_08950
Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.592
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.572
murQ
N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
    0.492
BAMA_17415
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
BAMA_20565
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
BAMA_21335
2-hydroxy-6-oxononatrienedioate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.441
BAMA_03820
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.422
BAMA_00650
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.416
guaB
Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
  0.412
BAMA_03910
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.409
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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