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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_04625Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)    
Predicted Functional Partners:
BAMA_04620
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.714
BAMA_04610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.701
BAMA_04615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.609
BAMA_04630
Aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.603
BAMA_22745
Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.542
BAMA_06175
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.516
BAMA_06170
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.495
BAMA_13345
Alkylhydroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.473
BAMA_06360
3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.472
BAMA_09560
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.472
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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