Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_04845Acetylhydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)    
Predicted Functional Partners:
BAMA_21335
2-hydroxy-6-oxononatrienedioate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.616
BAMA_20765
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
BAMA_23380
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.547
BAMA_04840
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.544
BAMA_04835
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.531
BAMA_15475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.491
BAMA_19020
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
BAMA_16400
Glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.458
BAMA_20930
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
BAMA_19620
Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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