STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_08020Butanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.874
BAMA_19235
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
0.745
BAMA_19005
NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
  
 0.678
BAMA_06595
NADH-flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.673
BAMA_16785
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.664
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
  
 
 0.652
BAMA_23450
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.652
BAMA_08025
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
BAMA_07545
Glyoxal reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.604
BAMA_09865
Glyoxal reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.604
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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