Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAMA_08335 | BAMA_08340 | BAMA_08335 | BAMA_08340 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family. | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.508 |
BAMA_08335 | BAMA_08345 | BAMA_08335 | BAMA_08345 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family. | Translocation-enhancing protein TepA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
BAMA_08340 | BAMA_08335 | BAMA_08340 | BAMA_08335 | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family. | 0.508 |
BAMA_08340 | BAMA_08345 | BAMA_08340 | BAMA_08345 | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Translocation-enhancing protein TepA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.844 |
BAMA_08340 | rnj-2 | BAMA_08340 | BAMA_08350 | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Zn-dependent hydrolase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily. | 0.552 |
BAMA_08345 | BAMA_08335 | BAMA_08345 | BAMA_08335 | Translocation-enhancing protein TepA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family. | 0.511 |
BAMA_08345 | BAMA_08340 | BAMA_08345 | BAMA_08340 | Translocation-enhancing protein TepA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.844 |
BAMA_08345 | rnj-2 | BAMA_08345 | BAMA_08350 | Translocation-enhancing protein TepA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Zn-dependent hydrolase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily. | 0.552 |
rnj-2 | BAMA_08340 | BAMA_08350 | BAMA_08340 | Zn-dependent hydrolase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily. | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.552 |
rnj-2 | BAMA_08345 | BAMA_08350 | BAMA_08345 | Zn-dependent hydrolase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily. | Translocation-enhancing protein TepA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.552 |