STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_09030Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)    
Predicted Functional Partners:
BAMA_09035
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0342 family.
 
    0.754
BAMA_10915
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.668
BAMA_09020
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.665
BAMA_00820
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.658
BAMA_12770
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.613
BAMA_09280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.609
BAMA_01270
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
BAMA_20000
Oxalate:formate antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
BAMA_13680
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.548
BAMA_23410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0435 family.
  
    0.540
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.