Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAMA_09360Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)    
Predicted Functional Partners:
BAMA_20890
Peptidase C45; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
BAMA_02335
Molybdenum cofactor biosynthesis protein MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
BAMA_11155
Stage VI sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
BAMA_23665
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
BAMA_21590
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
BAMA_09130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
BAMA_17350
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0736 family.
  
     0.552
BAMA_21785
FMN-dependent NADH-azoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.544
lexA
LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
   
  
 0.536
BAMA_01125
Potassium channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.532
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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