STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_09575Glutathionylspermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)    
Predicted Functional Partners:
BAMA_09580
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.857
BAMA_09585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
BAMA_13395
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.654
BAMA_16580
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
BAMA_01770
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
BAMA_01965
Acetamide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
BAMA_01425
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.444
BAMA_16440
Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family.
     
 0.438
BAMA_24450
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.436
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
    
  0.435
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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