STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_09660Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)    
Predicted Functional Partners:
BAMA_13815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.735
BAMA_01505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
BAMA_05705
PBS lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
BAMA_23410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0435 family.
 
     0.656
BAMA_09125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.651
BAMA_01700
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0741 family.
  
     0.640
BAMA_09115
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
scpB
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
     
 0.585
sspH-2
Spore protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspH family.
  
     0.585
BAMA_10820
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.