STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_09830Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)    
Predicted Functional Partners:
xerD
Recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.828
BAMA_05240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
BAMA_09045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
BAMA_23460
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
BAMA_10920
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
BAMA_10840
Spore coat protein CotS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
BAMA_14115
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
BAMA_18560
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
BAMA_22240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.741
BAMA_22195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.