STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_13655Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (767 aa)    
Predicted Functional Partners:
BAMA_15960
Collagenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.677
BAMA_06555
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
BAMA_05200
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
BAMA_00805
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
BAMA_20625
VanZ family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
BAMA_13660
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
BAMA_02970
ECF-type sigma factor negative effector; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.487
BAMA_07470
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.477
BAMA_02055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.467
BAMA_07515
Chitin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.455
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.