Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_14005Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (67 aa)    
Predicted Functional Partners:
BAMA_14010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.914
BAMA_16565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
BAMA_05240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.722
BAMA_13985
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.715
BAMA_17195
Spore gernimation protein GerPC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.708
BAMA_09830
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
BAMA_09070
Cytochrome B6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
BAMA_12875
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.
  
     0.689
BAMA_11725
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
BAMA_18570
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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