Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_14435Fatty acid hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)    
Predicted Functional Partners:
BAMA_16095
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.845
BAMA_03265
Squalene-hopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.771
BAMA_22880
Lipid kinase; Similar to YegS from E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.747
BAMA_19900
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.709
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
  
 
   0.648
BAMA_03715
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
   
 0.628
BAMA_02285
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.611
BAMA_15985
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.609
BAMA_16795
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.601
BAMA_19485
acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.597
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.