STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_14830D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)    
Predicted Functional Partners:
BAMA_14835
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.589
BAMA_17835
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
BAMA_19020
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
BAMA_17840
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
BAMA_21170
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.567
BAMA_19110
Bacitracin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
BAMA_14825
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
BAMA_13045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.525
BAMA_18515
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.519
BAMA_05800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.499
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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