STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_14980Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)    
Predicted Functional Partners:
BAMA_14975
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
BAMA_18510
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.719
BAMA_06085
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.646
BAMA_18515
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.639
BAMA_14985
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.594
BAMA_14995
Diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
       0.547
BAMA_14990
Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.531
BAMA_07945
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
BAMA_14970
NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.423
BAMA_05705
PBS lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.417
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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