STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_17850Multidrug ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (597 aa)    
Predicted Functional Partners:
BAMA_17845
Renal dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.953
BAMA_17835
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.800
BAMA_17840
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.794
BAMA_17735
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.716
BAMA_17825
Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.705
BAMA_17730
Beta-glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.642
BAMA_08050
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
  
 
  0.570
BAMA_07485
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.568
BAMA_17750
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.566
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.534
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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