Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAMA_19035Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)    
Predicted Functional Partners:
BAMA_16395
Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.868
BAMA_09085
Cytochrome B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.824
BAMA_13610
Ferredoxin--nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.796
tatC
Preprotein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.772
BAMA_22795
Nitronate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.766
BAMA_06925
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.714
BAMA_06960
Cadmium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.670
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.665
BAMA_14875
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.643
BAMA_19025
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.630
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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