Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAMA_19640Spermidine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)    
Predicted Functional Partners:
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
     
  0.813
BAMA_19620
Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.717
BAMA_01640
Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
     
  0.711
BAMA_05225
Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
     
  0.711
BAMA_03825
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.689
BAMA_13635
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.501
BAMA_20945
Spermidine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.482
BAMA_16775
Spermidine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.471
BAMA_03505
Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
     
  0.469
BAMA_07370
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
     
  0.469
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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