STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_19725Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)    
Predicted Functional Partners:
BAMA_19720
Cardiolipin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
  
    0.702
BAMA_23765
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.625
tgl
Transglutaminase; Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links. Belongs to the bacillus TGase family.
   
  
 0.584
BAMA_01730
Spore gernimation protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.558
tlp
Small acid-soluble spore protein Tlp; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Tlp family.
   
  
 0.535
BAMA_13440
Imidazole glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.480
BAMA_20015
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.480
sspP
SASP P; found in forespore compartment; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspP family.
   
  
 0.476
BAMA_08220
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.435
BAMA_24265
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.428
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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