STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_19770Macrolide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)    
Predicted Functional Partners:
BAMA_01795
Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.537
BAMA_18335
Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.537
BAMA_01105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.505
BAMA_22370
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.503
BAMA_20530
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.499
BAMA_04350
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
BAMA_19405
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
BAMA_10385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
BAMA_23240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.462
BAMA_01955
Nitric oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
  
     0.457
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.