STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_20280DNA alkylation repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (82 aa)    
Predicted Functional Partners:
BAMA_10920
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
BAMA_11970
carnitine--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
BAMA_14230
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
BAMA_18560
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.654
BAMA_09820
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.602
BAMA_09135
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
BAMA_23665
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
BAMA_24260
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
BAMA_11725
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.556
BAMA_20285
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.534
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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