Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAMA_21180Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)    
Predicted Functional Partners:
BAMA_21170
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.962
BAMA_21175
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.955
BAMA_21190
Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.876
BAMA_21200
Proline racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.763
BAMA_21195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the proline racemase family.
 
     0.750
BAMA_21185
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.722
BAMA_23815
Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.613
BAMA_06925
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.475
BAMA_23655
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.467
BAMA_14830
D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.454
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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