STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_21865Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)    
Predicted Functional Partners:
BAMA_21860
DoxX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.925
BAMA_01670
4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.
    
 0.843
BAMA_19970
4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.
    
 0.843
BAMA_21855
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.519
BAMA_00885
HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.488
BAMA_18135
General stress protein; Induced by heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.419
BAMA_24030
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.409
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.