STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_21990Competence protein; May be involved in regulation of competence genes; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)    
Predicted Functional Partners:
BAMA_21995
Competence protein ComE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.655
BAMA_23655
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.615
BAMA_00030
Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.608
BAMA_22005
Competence protein ComEC; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.600
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.532
BAMA_21195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the proline racemase family.
    
 0.516
BAMA_21200
Proline racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.516
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
     
 0.507
BAMA_23550
Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.498
BAMA_22000
Competence protein ComE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.495
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.