STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_22010Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (44 aa)    
Predicted Functional Partners:
BAMA_01505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
BAMA_22015
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.756
BAMA_02325
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.741
BAMA_22245
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.718
BAMA_11065
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
hpr
Transcriptional regulator Hpr; Negative regulator of protease production and sporulation.
  
     0.690
BAMA_14090
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
BAMA_14245
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.652
BAMA_01700
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0741 family.
  
     0.625
BAMA_14215
GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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