STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_22835Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)    
Predicted Functional Partners:
ligA
NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
  
  
 0.928
BAMA_22820
ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.897
BAMA_22815
Heptaprenylglyceryl phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.804
BAMA_02470
Replication initiation and membrane attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.767
BAMA_02200
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.718
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.712
BAMA_12770
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
BAMA_22830
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.707
BAMA_02840
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.697
BAMA_03600
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.