STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_23685Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)    
Predicted Functional Partners:
BAMA_15460
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.659
BAMA_12565
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.656
BAMA_21505
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.650
BAMA_12570
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.610
BAMA_15455
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.601
BAMA_19110
Bacitracin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.597
BAMA_12415
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
BAMA_24785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.547
BAMA_17790
Pectin lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.522
BAMA_12580
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.521
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.