STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMA_24255Spore protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (67 aa)    
Predicted Functional Partners:
BAMA_09690
Stage V sporulation protein AF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.760
BAMA_08220
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.745
BAMA_01730
Spore gernimation protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.732
BAMA_06320
Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.724
BAMA_07760
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
BAMA_12125
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.703
BAMA_01725
Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.679
BAMA_09710
Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.654
gpr
Peptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.652
BAMA_10945
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
Your Current Organism:
Bacillus manliponensis
NCBI taxonomy Id: 574376
Other names: B. manliponensis, Bacillus sp. BL4-6, JCM 15802, KCTC 13319, strain BL4-6
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